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Initalization of ZBBH-002 repo.

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root 2022-05-19 11:11:36 -04:00
commit 858e6ed46e
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data/ZBBH-002v2-TBP1_Amplification Data_20220517 225814.csv Normal file
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data/ZBBH-002v2-TBP1_Melt Curve Raw_20220517 225814.csv Normal file
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data/ZBBH-002v2-TBP1_Melt Curve Result_20220517 225814.csv Normal file
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# File Name: ZBBH-002v2-TBP1.eds
# Comment:
# Operator: DEFAULT
# Barcode:
# Instrument Type: QuantStudio™ 3 System
# Block Type: 96-Well 0.2-mL Block
# Instrument Name: 272323742
# Instrument Serial Number: 272323742
# Heated Cover Serial Number:
# Block Serial Number:
# Run Start Date/Time: 2022-05-17 04:33:33 PM UTC
# Run End Date/Time: 2022-05-17 06:22:22 PM UTC
# Run Duration: 108 minutes 48 seconds
# Sample Volume: 20.0
# Cover Temperature: 105.0
# Passive Reference: NONE
# PCR Stage/Step Number: Stage 2 Step 3
# Melt Stage Number: 3
# Quantification Cycle Method: CT
# Analysis Date/Time: 2022-05-17 10:48:45 PM UTC
# Software Name and Version: Design & Analysis Software v2.6.2
# Plugin Name and Version: Primary Analysis v1.7.0, Relative Quantification v1.5.0
# Exported By: guest
# Exported On: 2022-05-17 10:58:14 PM UTC
"Well","Well Position","Sample","Target","Tm","Melt Peak Height"
"1","A1","01","TBP1","79.78629302978516","101289.8046875"
"1","A1","01","TBP1","51.738197326660156","25642.66015625"
"1","A1","01","TBP1","60.67387390136719","23854.73828125"
"1","A1","01","TBP1","0.0","0.0"
"1","A1","01","TBP1","0.0","0.0"
"2","A2","04","TBP1","79.78629302978516","95107.53125"
"2","A2","04","TBP1","51.738197326660156","23334.8984375"
"2","A2","04","TBP1","58.936378479003906","22270.361328125"
"2","A2","04","TBP1","0.0","0.0"
"2","A2","04","TBP1","0.0","0.0"
"3","A3","05","TBP1","79.78483581542969","88696.984375"
"3","A3","05","TBP1","51.98649597167969","22120.806640625"
"3","A3","05","TBP1","61.91447448730469","20892.26953125"
"3","A3","05","TBP1","0.0","0.0"
"3","A3","05","TBP1","0.0","0.0"
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"4","A4","06","TBP1","51.49009704589844","21719.34375"
"4","A4","06","TBP1","0.0","0.0"
"4","A4","06","TBP1","0.0","0.0"
"4","A4","06","TBP1","0.0","0.0"
"5","A5","07","TBP1","79.78619384765625","90598.75"
"5","A5","07","TBP1","51.73828125","22895.3046875"
"5","A5","07","TBP1","0.0","0.0"
"5","A5","07","TBP1","0.0","0.0"
"5","A5","07","TBP1","0.0","0.0"
"6","A6","08","TBP1","79.78619384765625","84720.328125"
"6","A6","08","TBP1","51.98649215698242","21159.736328125"
"6","A6","08","TBP1","62.90780258178711","19681.76953125"
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"7","A7","09","TBP1","51.739097595214844","24399.673828125"
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"8","A8","10","TBP1","79.78562927246094","103596.15625"
"8","A8","10","TBP1","51.242698669433594","23417.447265625"
"8","A8","10","TBP1","0.0","0.0"
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"9","A9","11","TBP1","80.03373718261719","85167.9296875"
"9","A9","11","TBP1","62.659080505371094","24223.96484375"
"9","A9","11","TBP1","51.48965835571289","22803.91796875"
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"9","A9","11","TBP1","0.0","0.0"
"10","A10","12","TBP1","80.03373718261719","88467.078125"
"10","A10","12","TBP1","51.48965835571289","22933.900390625"
"10","A10","12","TBP1","0.0","0.0"
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"11","A11","13","TBP1","51.24210739135742","24447.5859375"
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"11","A11","13","TBP1","0.0","0.0"
"12","A12","14","TBP1","79.53709411621094","91694.296875"
"12","A12","14","TBP1","51.73851013183594","22468.98046875"
"12","A12","14","TBP1","0.0","0.0"
"12","A12","14","TBP1","0.0","0.0"
"12","A12","14","TBP1","0.0","0.0"
"13","B1","01","TBP1","79.53807830810547","109922.8046875"
"13","B1","01","TBP1","52.234622955322266","23605.04296875"
"13","B1","01","TBP1","89.46661376953125","2104.673828125"
"13","B1","01","TBP1","0.0","0.0"
"13","B1","01","TBP1","0.0","0.0"
"14","B2","04","TBP1","79.53807830810547","89065.9296875"
"14","B2","04","TBP1","51.48998260498047","21663.681640625"
"14","B2","04","TBP1","0.0","0.0"
"14","B2","04","TBP1","0.0","0.0"
"14","B2","04","TBP1","0.0","0.0"
"15","B3","05","TBP1","79.53663635253906","89110.296875"
"15","B3","05","TBP1","51.49009704589844","21882.72265625"
"15","B3","05","TBP1","71.09785461425781","18660.79296875"
"15","B3","05","TBP1","0.0","0.0"
"15","B3","05","TBP1","0.0","0.0"
"16","B4","06","TBP1","79.78483581542969","87996.140625"
"16","B4","06","TBP1","71.34605407714844","18567.34765625"
"16","B4","06","TBP1","51.49009704589844","21530.6328125"
"16","B4","06","TBP1","0.0","0.0"
"16","B4","06","TBP1","0.0","0.0"
"17","B5","07","TBP1","79.78619384765625","73698.0390625"
"17","B5","07","TBP1","71.84342193603516","16152.0869140625"
"17","B5","07","TBP1","62.163169860839844","17227.75"
"17","B5","07","TBP1","51.241859436035156","18823.75390625"
"17","B5","07","TBP1","0.0","0.0"
"18","B6","08","TBP1","79.53797912597656","86462.296875"
"18","B6","08","TBP1","63.15601348876953","19215.294921875"
"18","B6","08","TBP1","51.49006652832031","20537.76953125"
"18","B6","08","TBP1","58.93641662597656","19115.021484375"
"18","B6","08","TBP1","71.34700012207031","17766.99609375"
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"19","B7","09","TBP1","0.0","0.0"
"19","B7","09","TBP1","0.0","0.0"
"19","B7","09","TBP1","0.0","0.0"
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"20","B8","10","TBP1","79.78562927246094","88703.90625"
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"20","B8","10","TBP1","0.0","0.0"
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"21","B9","11","TBP1","72.33924865722656","19755.056640625"
"21","B9","11","TBP1","51.48965835571289","22301.78125"
"21","B9","11","TBP1","62.90728759765625","20581.09375"
"21","B9","11","TBP1","0.0","0.0"
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"22","B10","12","TBP1","51.48965835571289","22686.724609375"
"22","B10","12","TBP1","0.0","0.0"
"22","B10","12","TBP1","0.0","0.0"
"22","B10","12","TBP1","0.0","0.0"
"23","B11","13","TBP1","79.78529357910156","92829.34375"
"23","B11","13","TBP1","51.49031066894531","23839.166015625"
"23","B11","13","TBP1","0.0","0.0"
"23","B11","13","TBP1","0.0","0.0"
"23","B11","13","TBP1","0.0","0.0"
"24","B12","14","TBP1","79.53709411621094","102612.2109375"
"24","B12","14","TBP1","63.155784606933594","21972.115234375"
"24","B12","14","TBP1","51.73851013183594","22645.78515625"
"24","B12","14","TBP1","0.0","0.0"
"24","B12","14","TBP1","0.0","0.0"
"25","C1","01","iNOS_1","83.0130615234375","51305.984375"
"25","C1","01","iNOS_1","69.60955047607422","21093.537109375"
"25","C1","01","iNOS_1","0.0","0.0"
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"25","C1","01","iNOS_1","0.0","0.0"
"26","C2","04","iNOS_1","83.26127624511719","65813.40625"
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"27","C3","05","iNOS_1","51.73829650878906","23360.3046875"
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"27","C3","05","iNOS_1","0.0","0.0"
"28","C4","06","iNOS_1","83.25962829589844","63340.171875"
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"31","C7","09","iNOS_1","83.26042175292969","59319.0390625"
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data/ZBBH-002v2-TBP1_Multicomponent_20220517 225814.csv Normal file
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data/ZBBH-002v2-TBP1_RQ Replicate Group Result_20220517 225814.csv Normal file
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# File Name: ZBBH-002v2-TBP1.eds
# Comment:
# Operator: DEFAULT
# Barcode:
# Instrument Type: QuantStudio™ 3 System
# Block Type: 96-Well 0.2-mL Block
# Instrument Name: 272323742
# Instrument Serial Number: 272323742
# Heated Cover Serial Number:
# Block Serial Number:
# Run Start Date/Time: 2022-05-17 04:33:33 PM UTC
# Run End Date/Time: 2022-05-17 06:22:22 PM UTC
# Run Duration: 108 minutes 48 seconds
# Sample Volume: 20.0
# Cover Temperature: 105.0
# Passive Reference: NONE
# PCR Stage/Step Number: Stage 2 Step 3
# Melt Stage Number: 3
# Quantification Cycle Method: CT
# Analysis Date/Time: 2022-05-17 10:48:45 PM UTC
# Software Name and Version: Design & Analysis Software v2.6.2
# Plugin Name and Version: Primary Analysis v1.7.0, Relative Quantification v1.5.0
# Exported By: guest
# Exported On: 2022-05-17 10:58:14 PM UTC
"Sample","Target","EqCq Mean","Adjusted EqCq Mean","Delta EqCq Mean","Delta EqCq SD","Delta EqCq SE","Delta Delta EqCq","Rq","Rq Min","Rq Max","Omit"
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data/ZBBH-002v2-TBP1_Raw Data_20220517 225814.csv Normal file
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data/ZBBH-002v2-TBP1_Replicate Group Result_20220517 225814.csv Normal file
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# File Name: ZBBH-002v2-TBP1.eds
# Comment:
# Operator: DEFAULT
# Barcode:
# Instrument Type: QuantStudio™ 3 System
# Block Type: 96-Well 0.2-mL Block
# Instrument Name: 272323742
# Instrument Serial Number: 272323742
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# Run Start Date/Time: 2022-05-17 04:33:33 PM UTC
# Run End Date/Time: 2022-05-17 06:22:22 PM UTC
# Run Duration: 108 minutes 48 seconds
# Sample Volume: 20.0
# Cover Temperature: 105.0
# Passive Reference: NONE
# PCR Stage/Step Number: Stage 2 Step 3
# Melt Stage Number: 3
# Quantification Cycle Method: CT
# Analysis Date/Time: 2022-05-17 10:48:45 PM UTC
# Software Name and Version: Design & Analysis Software v2.6.2
# Plugin Name and Version: Primary Analysis v1.7.0, Relative Quantification v1.5.0
# Exported By: guest
# Exported On: 2022-05-17 10:58:14 PM UTC
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data/ZBBH-002v2-TBP1_Results_20220517 225814.csv Normal file
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# File Name: ZBBH-002v2-TBP1.eds
# Comment:
# Operator: DEFAULT
# Barcode:
# Instrument Type: QuantStudio™ 3 System
# Block Type: 96-Well 0.2-mL Block
# Instrument Name: 272323742
# Instrument Serial Number: 272323742
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# Run Start Date/Time: 2022-05-17 04:33:33 PM UTC
# Run End Date/Time: 2022-05-17 06:22:22 PM UTC
# Run Duration: 108 minutes 48 seconds
# Sample Volume: 20.0
# Cover Temperature: 105.0
# Passive Reference: NONE
# PCR Stage/Step Number: Stage 2 Step 3
# Melt Stage Number: 3
# Quantification Cycle Method: CT
# Analysis Date/Time: 2022-05-17 10:48:45 PM UTC
# Software Name and Version: Design & Analysis Software v2.6.2
# Plugin Name and Version: Primary Analysis v1.7.0, Relative Quantification v1.5.0
# Exported By: guest
# Exported On: 2022-05-17 10:58:14 PM UTC
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"41","D5","false","07","iNOS_1","UNKNOWN","SYBR","None","Amp","2.6802851403549233","","","25.15222779175169","0.9485668972119563","24.994909350733575","0.22248187289916266","true","41915.9486176816","true","3","18","83.26115417480469","","",""
"42","D6","false","08","iNOS_1","UNKNOWN","SYBR","None","Amp","2.6874750783574313","","","24.654931593378414","0.9578491919043223","24.831549461037707","0.24977538380100492","true","41915.9486176816","true","3","17","83.26115417480469","","",""
"43","D7","false","09","iNOS_1","UNKNOWN","SYBR","None","Amp","2.6591413389399268","","","24.431478903814472","0.9568901862712674","24.414520093707345","0.023983379252659576","true","41915.9486176816","true","3","18","83.01222229003906","","",""
"44","D8","false","10","iNOS_1","UNKNOWN","SYBR","None","Amp","2.6861269692073093","","","25.931203750733886","0.9682070526171909","25.93823082852114","0.009937788702135561","true","41915.9486176816","true","3","19","83.01222229003906","","",""
"45","D9","false","11","iNOS_1","UNKNOWN","SYBR","None","Amp","2.6929700101898106","","","27.113949864706647","0.9662824360545723","27.020904640333832","0.13158581822277313","true","41915.9486176816","true","3","19","83.26045989990234","","",""
"46","D10","false","12","iNOS_1","UNKNOWN","SYBR","None","Amp","2.7188785380990694","","","23.380415156900312","0.9720877094368396","23.413551836835286","0.04686234217744135","true","41915.9486176816","true","3","15","83.26045989990234","","",""
"47","D11","false","13","iNOS_1","UNKNOWN","SYBR","None","Amp","2.7190721304415066","","","24.313033558299047","0.9720552155483883","24.320395183103773","0.010410909639304603","true","41915.9486176816","true","3","17","83.01191711425781","","",""
"48","D12","false","14","iNOS_1","UNKNOWN","SYBR","None","Amp","2.728633700887806","","","29.26395857519166","0.9770523936960906","29.227662657183874","0.051330179506152374","true","41915.9486176816","true","3","22","82.76371765136719","","",""
"49","E1","false","15","TBP1","UNKNOWN","SYBR","None","Amp","2.692008844316768","","","27.331535667628224","0.9598925098050177","27.489816412695486","0.22384277633673114","true","36441.2847815307","true","3","20","79.53807830810547","","",""
"50","E2","false","NTC","TBP1","NTC","SYBR","None","No Amp","2.118260659978081","","","Undetermined","0.0","","","true","36441.2847815307","true","3","32","71.84346771240234","82.51663970947266","",""
"61","F1","false","15","TBP1","UNKNOWN","SYBR","None","Amp","2.6761783266893966","","","27.64809715776275","0.9570208383453958","27.489816412695486","0.22384277633673114","true","36441.2847815307","true","3","22","79.53807830810547","","",""
"62","F2","false","NTC","TBP1","NTC","SYBR","None","No Amp","2.175291621635111","","","Undetermined","0.0","","","true","36441.2847815307","true","3","30","72.09168243408203","","",""
"73","G1","false","15","iNOS_1","UNKNOWN","SYBR","None","Amp","2.709437249305749","","","26.247511785484093","0.9787321349964649","26.279441282712984","0.045155128020228974","true","41915.9486176816","true","3","18","83.0130615234375","","",""
"74","G2","false","NTC","iNOS_1","NTC","SYBR","None","Inconclusive","2.394372779206851","","","38.2743635196373","0.8480813210004466","38.314607452842","0.0569135161496583","true","41915.9486176816","true","3","28","78.54522705078125","","",""
"85","H1","false","15","iNOS_1","UNKNOWN","SYBR","None","Amp","2.7046998486419387","","","26.311370779941875","0.9664135792719887","26.279441282712984","0.045155128020228974","true","41915.9486176816","true","3","19","83.0130615234375","","",""
"86","H2","false","NTC","iNOS_1","NTC","SYBR","None","Inconclusive","2.38956419365965","","","38.354851386046704","0.7809969632688459","38.314607452842","0.0569135161496583","true","41915.9486176816","true","3","30","78.79344177246094","","",""
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data/ZBBH-002v2-TBP1_Sample Group Result_20220517 225814.csv Normal file
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# File Name: ZBBH-002v2-TBP1.eds
# Comment:
# Operator: DEFAULT
# Barcode:
# Instrument Type: QuantStudio™ 3 System
# Block Type: 96-Well 0.2-mL Block
# Instrument Name: 272323742
# Instrument Serial Number: 272323742
# Heated Cover Serial Number:
# Block Serial Number:
# Run Start Date/Time: 2022-05-17 04:33:33 PM UTC
# Run End Date/Time: 2022-05-17 06:22:22 PM UTC
# Run Duration: 108 minutes 48 seconds
# Sample Volume: 20.0
# Cover Temperature: 105.0
# Passive Reference: NONE
# PCR Stage/Step Number: Stage 2 Step 3
# Melt Stage Number: 3
# Quantification Cycle Method: CT
# Analysis Date/Time: 2022-05-17 10:48:45 PM UTC
# Software Name and Version: Design & Analysis Software v2.6.2
# Plugin Name and Version: Primary Analysis v1.7.0, Relative Quantification v1.5.0
# Exported By: guest
# Exported On: 2022-05-17 10:58:14 PM UTC
"Biological/Sample Group","Target","EqCq Mean","Adjusted EqCq Mean","Delta EqCq Mean","Delta EqCq SD","Delta EqCq SE","Delta Delta EqCq","Rq","Rq Min","Rq Max"
Can't render this file because it has a wrong number of fields in line 22.